PROCHECK Operating Manual

Sample plots

Below are examples of the PROCHECK plots for a protein structure called here 1abc.

Each example contains a brief Description of the plot and the main Options that can be selected via the parameter file, procheck.prm (described in Customizing the PROCHECK plots).

By clicking on the plot example given you will get a larger version of it.

1. Ramachandran plot
2. Ramachandran plots by residue type
3. Chi1-Chi2 plots
4. Main-chain parameters
5. Side-chain parameters
6. Residue properties
7. Main-chain bond length distributions
8. Main-chain bond angle distributions
9. RMS distances from planarity
10. Distorted geometry plots

In addition to the plots shown above, a detailed residue-by-residue listing and a single summary page are produced as ASCII text files (see Appendix D).